We show the distribution of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) genetic clades over time and between countries and outline potential genomic surveillance objectives. We applied three genomic nomenclature systems to all sequence data from the World Health Organization European Region available until 10 July 2020. We highlight the importance of real-time sequencing and data dissemination in a pandemic situation, compare the nomenclatures and lay a foundation for future European genomic surveillance of SARS-CoV-2.
Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020 / E., A., E. K., B., T., C., E. B., H., A. B., K., S., M., A., M., R. A., N., A., O., Niko Beerenwinkel, P.D., Posada-Céspedes, S., Philipp Jablonski, K., Falé Ferreira, P., Topolsky, I., Avšič-Županc, T., Korva, M., Poljak, M., Zakotnik, S., Mark Zorec, T., Bragstad, K., et al.. - In: EUROSURVEILLANCE. - ISSN 1560-7917. - 25:32(2020). [10.2807/1560-7917.ES.2020.25.32.2001410]
Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020
Adriano TagliabracciMembro del Collaboration Group
;Federica AlessandriniMembro del Collaboration Group
;Filomena MelchiondaMembro del Collaboration Group
;Valerio OnofriMembro del Collaboration Group
;Chiara TurchiMembro del Collaboration Group
;Patrizia BagnarelliMembro del Collaboration Group
;Stefano MenzoMembro del Collaboration Group
;Sara CaucciMembro del Collaboration Group
;Laura Di SanteMembro del Collaboration Group
;
2020-01-01
Abstract
We show the distribution of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) genetic clades over time and between countries and outline potential genomic surveillance objectives. We applied three genomic nomenclature systems to all sequence data from the World Health Organization European Region available until 10 July 2020. We highlight the importance of real-time sequencing and data dissemination in a pandemic situation, compare the nomenclatures and lay a foundation for future European genomic surveillance of SARS-CoV-2.| File | Dimensione | Formato | |
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